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Cofit
Protein
Homologs
Top cofit genes for GFF6247 from
Variovorax sp. SCN45
ApaG protein
SEED: ApaG protein
KEGG: ApaG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3337
16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170)
0.76
0.60
2
GFF5080
DNA recombination-dependent growth factor RdgC
0.65
0.60
3
GFF3599
Rhodanese-related sulfurtransferase
no
0.57
4
GFF990
LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22)
no
0.57
5
GFF2342
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
0.25
0.55
6
GFF232
Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
0.39
0.54
7
GFF6788
Multicopper oxidase
0.24
0.54
8
GFF3366
Septum site-determining protein MinD
0.42
0.54
9
GFF151
FIG00460174: hypothetical protein
no
0.53
10
GFF1110
Recombination protein RecR
no
0.53
11
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
0.57
0.53
12
GFF2934
FIG002076: hypothetical protein
0.24
0.52
13
GFF2792
Chaperone protein ClpB (ATP-dependent unfoldase)
0.47
0.52
14
GFF5383
DNA topoisomerase III, Burkholderia type (EC 5.99.1.2)
no
0.52
15
GFF988
LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23)
0.80
0.52
16
GFF2065
Peptidase, M23/M37 family
no
0.51
17
GFF6685
LSU ribosomal protein L36p @ LSU ribosomal protein L36p, zinc-independent
no
0.51
18
GFF3627
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
no
0.50
19
GFF625
Efflux transport system, outer membrane factor (OMF) lipoprotein
no
0.50
20
GFF5789
YciO protein, TsaC/YrdC paralog
0.45
0.50
Or look for
negative cofitness