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  • Top cofit genes for GFF6243 from Variovorax sp. SCN45

    Ku domain protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5308 Epoxide hydrolase (EC 3.3.2.9) 0.51 0.64
    2 GFF5243 General secretion pathway protein H no 0.62
    3 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.34 0.61
    4 GFF4655 SAM-dependent methyltransferase no 0.59
    5 GFF5580 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.59
    6 GFF4993 putative tetratricopeptide repeat family protein no 0.56
    7 GFF7027 no description no 0.56
    8 GFF1600 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.56
    9 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) no 0.54
    10 GFF5847 putative membrane protein no 0.54
    11 GFF4351 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.54
    12 GFF2436 no description no 0.53
    13 GFF6229 hypothetical protein no 0.52
    14 GFF2759 hypothetical protein 0.29 0.52
    15 GFF4045 no description no 0.52
    16 GFF4023 no description no 0.51
    17 GFF4545 Transcriptional regulator, AraC family no 0.51
    18 GFF4147 hypothetical protein no 0.51
    19 GFF3980 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) no 0.50
    20 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) no 0.50

    Or look for negative cofitness