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Cofit
Protein
Homologs
Top cofit genes for GFF6241 from
Variovorax sp. SCN45
Transglutaminase-like domain
SEED: Transglutaminase-like domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5682
TRAP-type transport system, periplasmic component
no
0.57
2
GFF2052
hypothetical protein
no
0.57
3
GFF5004
N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
no
0.53
4
GFF1771
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
no
0.53
5
GFF5976
Transcriptional regulator, AraC family
no
0.53
6
GFF2424
ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron)
no
0.51
7
GFF4135
Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme
no
0.50
8
GFF3908
FIG00582414: hypothetical protein
no
0.49
9
GFF6301
Pyruvate:Oxaloacetate transcarboxylase domain protein
no
0.49
10
GFF2819
Phosphoenolpyruvate synthase regulatory protein
no
0.48
11
GFF3715
Probable malonic semialdehyde reductase RutE (EC 1.1.1.298)
no
0.47
12
GFF6060
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.46
13
GFF2114
3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type
no
0.46
14
GFF5782
BUG/TctC family periplasmic protein
no
0.46
15
GFF378
RNA (nucleoside 2'-O)-methyltransferase
no
0.46
16
GFF5980
Cyanate hydratase (EC 4.2.1.104)
no
0.46
17
GFF2213
Flp pilus assembly protein, pilin Flp
no
0.46
18
GFF3311
FIG00349859: hypothetical protein
no
0.46
19
GFF736
hypothetical protein
no
0.45
20
GFF3945
Phosphate transport regulator (distant homolog of PhoU)
no
0.45
Or look for
negative cofitness