Top cofit genes for GFF6230 from Variovorax sp. SCN45

Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Rank Hit Name Description Conserved? Cofitness  
1 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.37 0.68
2 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.67
3 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.43 0.67
4 GFF6139 Serine/threonine kinase no 0.66
5 GFF7295 HPr kinase/phosphorylase no 0.65
6 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.65
7 GFF5356 Aldose 1-epimerase no 0.64
8 GFF2182 Inner membrane component of TAM transport system no 0.64
9 GFF6510 Gamma-glutamyltranspeptidase (EC 2.3.2.2) no 0.63
10 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.63 0.63
11 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.61
12 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.60
13 GFF2682 Protein containing domains DUF403 0.38 0.60
14 GFF7085 BUG/TctC family periplasmic protein no 0.60
15 GFF4726 hypothetical protein no 0.59
16 GFF2649 putative autotransporter protein no 0.59
17 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.58
18 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.58
19 GFF1551 hypothetical protein no 0.58
20 GFF636 Urea ABC transporter, substrate-binding protein UrtA 0.33 0.58

Or look for negative cofitness