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Cofit
Protein
Homologs
Top cofit genes for GFF622 from
Variovorax sp. SCN45
BUG/TctC family periplasmic protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5772
Flagellar biosynthesis protein FlhF
no
0.54
2
GFF2263
putative membrane protein
no
0.52
3
GFF2778
Fosmidomycin resistance protein
no
0.51
4
GFF7104
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
no
0.50
5
GFF4003
FIGfam005179
no
0.49
6
GFF6691
hypothetical protein
no
0.48
7
GFF7161
Transcriptional regulator, LysR family
no
0.48
8
GFF2535
Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
no
0.47
9
GFF3006
hypothetical protein
no
0.46
10
GFF4709
putative membrane protein
no
0.46
11
GFF5168
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
no
0.46
12
GFF306
FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase
no
0.45
13
GFF2076
Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily
no
0.45
14
GFF4726
hypothetical protein
no
0.45
15
GFF2666
Membrane-bound lytic murein transglycosylase B
no
0.45
16
GFF5185
FIG00732904: hypothetical protein
no
0.45
17
GFF3382
3-keto-5-aminohexanoate cleavage enzyme (EC 2.3.1.247)
no
0.44
18
GFF6624
hypothetical protein
no
0.44
19
GFF898
putative oxygenase subunit
no
0.44
20
GFF1397
TRAP-type C4-dicarboxylate transport system, large permease component
no
0.44
Or look for
negative cofitness