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  • Top cofit genes for GFF6208 from Variovorax sp. SCN45

    Cytosine/purine/uracil/thiamine/allantoin permease family protein
    SEED: Hydantoin permease
    KEGG: nucleobase:cation symporter-1, NCS1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4388 Type IV secretory pathway, protease TraF no 0.64
    2 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.62
    3 GFF7322 hypothetical protein no 0.61
    4 GFF3939 Hydrolase, HAD superfamily no 0.61
    5 GFF6740 hypothetical protein no 0.59
    6 GFF3945 Phosphate transport regulator (distant homolog of PhoU) 0.48 0.59
    7 GFF916 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) no 0.59
    8 GFF3300 hypothetical protein no 0.58
    9 GFF4405 hypothetical protein no 0.58
    10 GFF6743 no description no 0.57
    11 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) no 0.57
    12 GFF6088 Phenylacetic acid degradation protein PaaY no 0.56
    13 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily no 0.56
    14 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) no 0.56
    15 GFF4397 hypothetical protein no 0.56
    16 GFF259 Bis-ABC ATPase YheS 0.32 0.56
    17 GFF183 Virulence protein no 0.56
    18 GFF4210 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 0.17 0.55
    19 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) 0.18 0.54
    20 GFF4069 DNA-binding heavy metal response regulator no 0.54

    Or look for negative cofitness