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  • Top cofit genes for GFF6200 from Variovorax sp. SCN45

    integral membrane sensor signal transduction histidine kinase
    SEED: Tricarboxylate transport sensor protein TctE

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2683 Protein containing domains DUF404, DUF407 no 0.75
    2 GFF7295 HPr kinase/phosphorylase no 0.71
    3 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.70
    4 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.69
    5 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) no 0.67
    6 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.67
    7 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.67
    8 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.66
    9 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.66
    10 GFF5994 Chlorogenate esterase no 0.65
    11 GFF5598 putative phospholipase D family protein no 0.65
    12 GFF7322 hypothetical protein no 0.63
    13 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) no 0.63
    14 GFF4396 Mobile element protein no 0.63
    15 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.62
    16 GFF3135 no description no 0.62
    17 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.62
    18 GFF6635 FIG00441227: hypothetical protein no 0.62
    19 GFF6812 no description no 0.61
    20 GFF6474 hypothetical protein no 0.61

    Or look for negative cofitness