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  • Top cofit genes for GFF620 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: LysR-family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6866 hypothetical protein no 0.58
    2 GFF332 hypothetical protein no 0.54
    3 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) no 0.53
    4 GFF3149 RND efflux system, inner membrane transporter no 0.52
    5 GFF1939 hypothetical protein no 0.50
    6 GFF3187 hypothetical protein no 0.49
    7 GFF7230 Threonine dehydrogenase and related Zn-dependent dehydrogenases no 0.49
    8 GFF23 no description no 0.49
    9 GFF4041 Lipid A phosphoethanolamine transferase, putative no 0.49
    10 GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.49
    11 GFF2120 Type IV fimbrial biogenesis protein PilX no 0.48
    12 GFF1803 hypothetical protein no 0.48
    13 GFF2403 CHAP domain containing protein no 0.46
    14 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.45
    15 GFF2708 no description no 0.45
    16 GFF284 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.45
    17 GFF1690 KEGG: DNA-binding protein H-NS no 0.45
    18 GFF984 Protein phosphatase 2C-like no 0.45
    19 GFF5190 L-arabinose 1-dehydrogenase (EC 1.1.1.376) no 0.45
    20 GFF2632 no description no 0.44

    Or look for negative cofitness