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Cofit
Protein
Homologs
Top cofit genes for GFF62 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4138
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.57
2
GFF173
Hexuronate utilization operon transcriptional repressor ExuR
no
0.50
3
GFF879
BUG/TctC family periplasmic protein
no
0.50
4
GFF1208
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.50
5
GFF2259
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.49
6
GFF4070
no description
no
0.48
7
GFF588
putative membrane protein
no
0.48
8
GFF6599
NAD-dependent formate dehydrogenase alpha subunit
no
0.46
9
GFF3997
Short-chain dehydrogenase/reductase SDR
no
0.45
10
GFF4680
tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)
no
0.44
11
GFF1475
no description
no
0.44
12
GFF2449
Beta-ureidopropionase (EC 3.5.1.6)
no
0.43
13
GFF2721
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.42
14
GFF1934
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.42
15
GFF5289
hypothetical protein
no
0.42
16
GFF6159
carbon monoxide dehydrogenase G protein
no
0.42
17
GFF5785
FIG00931285: hypothetical protein
no
0.42
18
GFF1487
Tetrapartite efflux system component, FusD-like
no
0.42
19
GFF4949
ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
no
0.42
20
GFF2665
FIG001454: Transglutaminase-like enzymes, putative cysteine proteases
no
0.42
Or look for
negative cofitness