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  • Top cofit genes for GFF6174 from Variovorax sp. SCN45

    Fluoride ion transporter CrcB
    SEED: Protein crcB homolog
    KEGG: CrcB protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.57
    2 GFF3409 Probable lipoprotein signal peptide no 0.56
    3 GFF4301 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.55
    4 GFF2695 no description no 0.54
    5 GFF5934 hypothetical protein no 0.53
    6 GFF5989 RND efflux system, membrane fusion protein no 0.53
    7 GFF2964 L-carnitine dehydratase/bile acid-inducible protein F no 0.52
    8 GFF6597 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF no 0.52
    9 GFF3238 no description no 0.51
    10 GFF3655 no description no 0.51
    11 GFF4070 no description no 0.51
    12 GFF173 Hexuronate utilization operon transcriptional repressor ExuR no 0.51
    13 GFF7138 ATP-dependent 23S rRNA helicase DbpA 0.14 0.51
    14 GFF6467 Nucleoside-diphosphate-sugar epimerases no 0.51
    15 GFF754 FIG00975093: hypothetical protein no 0.51
    16 GFF1171 Transcriptional regulator, AraC family no 0.50
    17 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 0.45 0.50
    18 GFF4614 Transcriptional regulator, AraC family no 0.50
    19 GFF2368 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.50
    20 GFF74 Transcriptional regulator, LysR family no 0.49

    Or look for negative cofitness