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  • Top cofit genes for GFF6166 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family
    KEGG: TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2028 Uncharacterized MFS-type transporter no 0.65
    2 GFF2840 Integral membrane protein, interacts with FtsH no 0.63
    3 GFF7035 UspA no 0.61
    4 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.60
    5 GFF1142 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.58
    6 GFF2131 Putative protease no 0.57
    7 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) no 0.57
    8 GFF460 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.57
    9 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) no 0.57
    10 GFF4369 no description no 0.56
    11 GFF5474 no description no 0.56
    12 GFF1173 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) no 0.55
    13 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein no 0.55
    14 GFF6911 Transcriptional regulator, LacI family no 0.55
    15 GFF2297 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) no 0.54
    16 GFF4829 Isocitrate lyase (EC 4.1.3.1) no 0.54
    17 GFF3727 Transcriptional regulator, AcrR family no 0.54
    18 GFF7064 Glutamate--cysteine ligase (EC 6.3.2.2) no 0.54
    19 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.54
    20 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) no 0.53

    Or look for negative cofitness