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  • Top cofit genes for GFF6137 from Variovorax sp. SCN45

    TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6
    SEED: TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1522 Ferrichrome-iron receptor no 0.58
    2 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.57
    3 GFF2708 no description no 0.55
    4 GFF506 hypothetical protein no 0.55
    5 GFF5191 Galactose-binding protein regulator no 0.54
    6 GFF7376 Transcriptional regulator, LysR family no 0.52
    7 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.52
    8 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.77 0.51
    9 GFF1373 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.51
    10 GFF6175 hypothetical protein no 0.51
    11 GFF5292 no description no 0.51
    12 GFF2229 Pca regulon regulatory protein PcaR no 0.51
    13 GFF2172 Permease of the drug/metabolite transporter (DMT) superfamily no 0.51
    14 GFF7315 no description no 0.50
    15 GFF5546 Lactam utilization protein LamB no 0.50
    16 GFF252 Zinc-type alcohol dehydrogenase-like protein no 0.49
    17 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) no 0.49
    18 GFF7140 FIG00349159: hypothetical protein no 0.49
    19 GFF3947 Putative transmembrane protein no 0.48
    20 GFF6126 putative membrane protein 0.41 0.48

    Or look for negative cofitness