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  • Top cofit genes for GFF6136 from Variovorax sp. SCN45

    TRAP transporter solute receptor, unknown substrate 6
    SEED: TRAP transporter solute receptor, unknown substrate 6

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1737 Carbon starvation protein A no 0.64
    2 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.38 0.63
    3 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) no 0.62
    4 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.61
    5 GFF2099 Acyl-CoA dehydrogenase no 0.58
    6 GFF4488 Metal-binding GTPase YjiA no 0.58
    7 GFF699 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.58
    8 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.57
    9 GFF6887 Transporter, LysE family no 0.57
    10 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.57
    11 GFF1392 Monooxygenase, flavin-binding family no 0.55
    12 GFF1660 Type IV fimbrial biogenesis protein PilY1 no 0.54
    13 GFF491 no description no 0.54
    14 GFF2842 RNA polymerase sigma factor RpoS no 0.53
    15 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) no 0.53
    16 GFF1168 Arginyl-tRNA--protein transferase (EC 2.3.2.8) 0.21 0.53
    17 GFF4334 Enoyl-CoA hydratase (EC 4.2.1.17) 0.34 0.53
    18 GFF3649 C-type cytochrome biogenesis protein ResA (thioredoxin) no 0.52
    19 GFF7156 hypothetical protein no 0.52
    20 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) no 0.51

    Or look for negative cofitness