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  • Top cofit genes for GFF6135 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4620 Gluconolactonase (EC 3.1.1.17) no 0.61
    2 GFF7105 Homoprotocatechuate degradative operon repressor no 0.60
    3 GFF3262 Polymer-forming bactofilin no 0.55
    4 GFF3572 Efflux ABC transporter, permease protein no 0.54
    5 GFF6262 Transcriptional regulator PhnF no 0.52
    6 GFF1705 ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) / C-terminal AAA-associated domain no 0.51
    7 GFF4989 Transcriptional regulator, LysR family no 0.50
    8 GFF6704 no description no 0.50
    9 GFF1550 no description no 0.49
    10 GFF3335 no description no 0.49
    11 GFF4232 no description no 0.49
    12 GFF6910 Xanthine permease 0.42 0.49
    13 GFF2919 no description no 0.48
    14 GFF3166 Transcriptional regulator, IclR family no 0.48
    15 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.28 0.48
    16 GFF6753 hypothetical protein no 0.47
    17 GFF7212 Nitrilotriacetate monooxygenase [FMNH2] no 0.46
    18 GFF6489 no description 0.29 0.46
    19 GFF3516 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) no 0.46
    20 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.46

    Or look for negative cofitness