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  • Top cofit genes for GFF6131 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5475 Uncharacterized MFS-type transporter no 0.64
    2 GFF4670 Transcriptional regulator, AcrR family no 0.59
    3 GFF6947 transcriptional regulator, Crp/Fnr family no 0.52
    4 GFF3329 Terpene utilization protein AtuA no 0.50
    5 GFF485 hypothetical protein no 0.50
    6 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.49
    7 GFF1198 no description no 0.49
    8 GFF2832 Uncharacterized protein PA4513 no 0.49
    9 GFF3965 Alcohol dehydrogenase, zinc-binding no 0.48
    10 GFF3114 Methionine ABC transporter ATP-binding protein no 0.48
    11 GFF4287 Acyl-CoA dehydrogenase no 0.47
    12 GFF6471 Transcriptional regulator, AraC family no 0.47
    13 GFF4134 Small molecule metabolism no 0.46
    14 GFF1947 no description no 0.46
    15 GFF3976 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46
    16 GFF2253 no description no 0.45
    17 GFF5213 hypothetical protein no 0.45
    18 GFF313 FIG027190: Putative transmembrane protein no 0.45
    19 GFF6090 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.44
    20 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.44

    Or look for negative cofitness