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Cofit
Protein
Homologs
Top cofit genes for GFF6126 from
Variovorax sp. SCN45
putative membrane protein
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2562
UPF0391 membrane protein RGE_28580
no
0.63
2
GFF4742
ABC transporter, substrate-binding protein RSc1750
no
0.62
3
GFF5729
Methyl-accepting chemotaxis sensor/transducer protein
no
0.61
4
GFF2046
no description
no
0.60
5
GFF4435
hypothetical protein
no
0.59
6
GFF3219
hypothetical protein
no
0.59
7
GFF1636
Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules
no
0.59
8
GFF1652
Uncharacterized MFS-type transporter
no
0.59
9
GFF6888
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.59
10
GFF1353
Short-chain dehydrogenase/reductase SDR
no
0.59
11
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.58
12
GFF4747
Quinone oxidoreductase (EC 1.6.5.5)
no
0.58
13
GFF486
FIG00582348: hypothetical protein
no
0.58
14
GFF924
hypothetical protein
no
0.58
15
GFF4611
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
no
0.57
16
GFF2383
Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW
0.25
0.57
17
GFF1486
Tetrapartite efflux system, inner membrane component FusBC-like
0.44
0.57
18
GFF237
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.57
19
GFF116
RidA/YER057c/UK114 superfamily, group 1
no
0.57
20
GFF4175
FMN reductase (NADH) (EC 1.5.1.42)
no
0.57
Or look for
negative cofitness