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  • Top cofit genes for GFF6123 from Variovorax sp. SCN45

    ABC-type antimicrobial peptide transport system, ATPase component
    SEED: Methionine ABC transporter ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7242 hypothetical protein no 0.58
    2 GFF277 HD domain protein no 0.54
    3 GFF1185 Transcriptional regulator, AraC family no 0.53
    4 GFF6452 Putative diheme cytochrome c-553 0.35 0.51
    5 GFF3455 Two component response regulator associated with urea and amide use no 0.51
    6 GFF1752 Cysteine dioxygenase (EC 1.13.11.20) no 0.51
    7 GFF4916 FIG00959407: hypothetical protein no 0.48
    8 GFF2330 FOG: TPR repeat no 0.48
    9 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) 0.24 0.46
    10 GFF5030 no description no 0.46
    11 GFF2147 no description no 0.46
    12 GFF574 Tol-Pal system-associated acyl-CoA thioesterase no 0.45
    13 GFF6245 no description no 0.45
    14 GFF4502 Putative transmembrane protein no 0.44
    15 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) no 0.44
    16 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.43
    17 GFF7278 Transposase no 0.43
    18 GFF632 Urea ABC transporter, ATPase protein UrtE no 0.43
    19 GFF3530 Pseudouridine synthase no 0.43
    20 GFF3427 FIG01006093: hypothetical protein no 0.43

    Or look for negative cofitness