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  • Top cofit genes for GFF6122 from Variovorax sp. SCN45

    ABC-type antimicrobial peptide transport system, permease component
    SEED: ABC-type antimicrobial peptide transport system, permease component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5178 Transcriptional regulator, Xre-family with cupin domain no 0.64
    2 GFF943 Intracellular PHB depolymerase no 0.60
    3 GFF5769 Chemotaxis response - phosphatase CheZ 0.26 0.60
    4 GFF683 Transcriptional regulator, LysR family no 0.59
    5 GFF808 Polyhydroxyalkanoic acid synthase 0.27 0.56
    6 GFF4253 hypothetical protein no 0.55
    7 GFF3784 ABC transporter, substrate-binding protein RSc1750 no 0.53
    8 GFF5796 no description no 0.53
    9 GFF1072 no description no 0.53
    10 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.27 0.52
    11 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.52
    12 GFF1503 Dihydrofolate reductase homolog no 0.52
    13 GFF3828 hypothetical protein no 0.52
    14 GFF386 Membrane-associated zinc metalloprotease 0.25 0.52
    15 GFF5742 Flagellar motor switch protein FliN no 0.51
    16 GFF4663 no description no 0.51
    17 GFF5653 Acyl-CoA dehydrogenase (EC 1.3.8.1), Mycobacterial subgroup FadE16 no 0.51
    18 GFF6110 N-acyl-D-amino-acid deacylase (EC 3.5.1.81) no 0.50
    19 GFF5249 Protein YhfA 0.37 0.50
    20 GFF500 Lysine exporter protein (LYSE/YGGA) no 0.50

    Or look for negative cofitness