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  • Top cofit genes for PS417_03110 from Pseudomonas simiae WCS417

    pilus assembly protein CpaB
    SEED: Flp pilus assembly protein RcpC/CpaB
    KEGG: pilus assembly protein CpaB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03070 LuxR family transcriptional regulator 0.41 0.40
    2 PS417_03895 methyltransferase 0.34 0.36
    3 PS417_03065 peptidase A24 0.24 0.36
    4 PS417_03910 pilus assembly protein no 0.35
    5 PS417_03095 ATPase 0.36 0.34
    6 PS417_20955 secretion protein no 0.34
    7 PS417_06365 RNA polymerase sigma factor no 0.34
    8 PS417_03090 type II secretion system protein F 0.32 0.33
    9 PS417_03060 pilus assembly protein TadE 0.46 0.33
    10 PS417_03050 hypothetical protein 0.53 0.32
    11 PS417_23645 amino acid permease no 0.32
    12 PS417_21375 ADP-ribosylglycohydrolase no 0.31
    13 PS417_22610 pilus assembly protein PilZ 0.49 0.29
    14 PS417_03115 pilus assembly protein 0.34 0.29
    15 PS417_23635 membrane protein no 0.28
    16 PS417_06970 LysR family transcriptional regulator no 0.28
    17 PS417_03125 potassium ABC transporter ATPase 0.47 0.28
    18 PS417_12550 chemotaxis protein no 0.28
    19 PS417_26080 TonB-dependent receptor 0.41 0.27
    20 PS417_22310 CAIB/BAIF family CoA transferase no 0.27

    Or look for negative cofitness