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  • Top cofit genes for GFF6118 from Variovorax sp. SCN45

    Transcriptional regulator, MerR family
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4369 no description no 0.53
    2 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 no 0.50
    3 GFF5479 hypothetical protein no 0.49
    4 GFF5982 Transcriptional regulator, AcrR family no 0.48
    5 GFF650 Response regulator no 0.47
    6 GFF6396 hypothetical protein no 0.47
    7 GFF1418 Transcriptional regulator, LysR family no 0.47
    8 GFF5916 T6SS component TssA (ImpA) no 0.47
    9 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.46
    10 GFF3013 KEGG: type VI secretion system secreted protein Hcp no 0.45
    11 GFF4198 putative LuxA no 0.45
    12 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.44
    13 GFF1914 Guanine deaminase (EC 3.5.4.3) no 0.43
    14 GFF1597 Acetolactate synthase large subunit (EC 2.2.1.6) no 0.43
    15 GFF3566 Transcriptional regulator, LysR family no 0.43
    16 GFF4275 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.42
    17 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.42
    18 GFF2601 Transcriptional regulator, IclR family no 0.42
    19 GFF5070 Zn-dependent protease with chaperone function no 0.42
    20 GFF1229 4-hydroxybutyrate coenzyme A transferase no 0.42

    Or look for negative cofitness