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  • Top cofit genes for GFF6114 from Variovorax sp. SCN45

    ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
    SEED: ABC transporter permease protein
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1365 no description no 0.58
    2 GFF690 Transcriptional regulator, IclR family no 0.58
    3 GFF2911 Predicted D-glucarate or D-galactorate regulator, GntR family no 0.56
    4 GFF3723 Cytochrome c5 no 0.56
    5 GFF4111 ABC-type amino acid transport/signal transduction system, periplasmic component/domain no 0.55
    6 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.54
    7 GFF4662 no description no 0.53
    8 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.53
    9 GFF4007 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.53
    10 GFF4667 hypothetical protein no 0.53
    11 GFF706 hypothetical protein no 0.53
    12 GFF5310 Cytochrome c4 no 0.53
    13 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) no 0.52
    14 GFF2999 Putative transmembrane protein no 0.52
    15 GFF1221 KEGG: putative acetyltransferase no 0.52
    16 GFF168 MCP methyltransferase, CheR-type no 0.52
    17 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.34 0.52
    18 GFF3138 VgrG protein no 0.52
    19 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.52
    20 GFF2623 Aspartate aminotransferase no 0.52

    Or look for negative cofitness