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  • Top cofit genes for GFF6112 from Variovorax sp. SCN45

    Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1)
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3348 Putative lipase no 0.58
    2 GFF1207 no description no 0.57
    3 GFF2406 DipZ protein no 0.54
    4 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.52
    5 GFF6144 2-aminoethylphosphonate ABC transporter substrate-binding protein no 0.51
    6 GFF1178 hypothetical protein no 0.51
    7 GFF5656 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) no 0.51
    8 GFF5375 Acyl-CoA dehydrogenase no 0.49
    9 GFF2742 Metal-dependent hydrolases of the beta-lactamase superfamily I no 0.49
    10 GFF838 hypothetical protein no 0.49
    11 GFF5240 General secretion pathway protein K no 0.48
    12 GFF4671 putative membrane protein no 0.48
    13 GFF1270 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA no 0.48
    14 GFF4586 no description no 0.47
    15 GFF2551 Endonuclease/exonuclease/phosphatase no 0.47
    16 GFF5597 Two-component transcriptional response regulator, LuxR family no 0.47
    17 GFF4685 Copper sensory histidine kinase CusS no 0.46
    18 GFF1354 FMN-dependent NADH-azoreductase (EC 1.7.1.6) no 0.46
    19 GFF2632 no description no 0.46
    20 GFF1226 Heavy-chain fibroin (Fragment) no 0.45

    Or look for negative cofitness