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Cofit
Protein
Homologs
Top cofit genes for GFF6100 from
Variovorax sp. SCN45
no description
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3886
Putative transmembrane protein
no
0.67
2
GFF2153
type IV pili signal transduction protein PilI
no
0.67
3
GFF3743
Twitching motility protein PilT
no
0.67
4
GFF4439
Probable transmembrane protein
no
0.66
5
GFF4298
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
no
0.64
6
GFF2519
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
no
0.60
7
GFF2847
histone-like nucleoid-structuring protein H-NS
no
0.59
8
GFF5128
hypothetical protein
no
0.59
9
GFF2155
Signal transduction histidine kinase CheA
no
0.59
10
GFF6527
Transcriptional regulator, AcrR family
no
0.58
11
GFF5417
hypothetical protein
no
0.58
12
GFF5416
Type IV fimbrial biogenesis protein PilW
no
0.58
13
GFF6075
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
no
0.58
14
GFF4826
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.58
15
GFF5319
Type IV pilus biogenesis protein PilM
no
0.57
16
GFF5418
Type IV fimbrial biogenesis protein PilY1
no
0.57
17
GFF993
Type IV pilus biogenesis protein PilF
no
0.57
18
GFF5419
Type IV pilus biogenesis protein PilE
no
0.57
19
GFF370
23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166)
no
0.57
20
GFF303
Probable transcriptional regulatory protein YebC
no
0.57
Or look for
negative cofitness