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  • Top cofit genes for PS417_03095 from Pseudomonas simiae WCS417

    ATPase
    SEED: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
    KEGG: pilus assembly protein CpaF

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03105 secretin 0.91 0.47
    2 PS417_03050 hypothetical protein 0.62 0.44
    3 PS417_03060 pilus assembly protein TadE 0.52 0.39
    4 PS417_03070 LuxR family transcriptional regulator 0.48 0.39
    5 PS417_03895 methyltransferase 0.39 0.38
    6 PS417_03065 peptidase A24 0.34 0.38
    7 PS417_03090 type II secretion system protein F 0.91 0.36
    8 PS417_03910 pilus assembly protein no 0.36
    9 PS417_03110 pilus assembly protein CpaB 0.36 0.34
    10 PS417_03075 hypothetical protein 0.50 0.34
    11 PS417_17085 fimbrial assembly protein 0.42 0.31
    12 PS417_09640 capsular biosynthesis protein no 0.31
    13 PS417_03125 potassium ABC transporter ATPase 0.73 0.30
    14 PS417_03055 histidine kinase 0.54 0.30
    15 PS417_07615 TetR family transcriptional regulator no 0.30
    16 PS417_24820 ethanolamine ammonia-lyase no 0.27
    17 PS417_03080 hypothetical protein 0.38 0.27
    18 PS417_22610 pilus assembly protein PilZ 0.50 0.27
    19 PS417_03085 type II secretion system protein F 0.38 0.26
    20 PS417_19995 Long-chain fatty acid transport protein no 0.26

    Or look for negative cofitness