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  • Top cofit genes for GFF6088 from Variovorax sp. SCN45

    Phenylacetic acid degradation protein PaaY
    SEED: Phenylacetic acid degradation protein PaaY
    KEGG: carnitine operon protein CaiE

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6758 Lactoylglutathione lyase (EC 4.4.1.5) 0.55 0.66
    2 GFF4356 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.57
    3 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.56
    4 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.56
    5 GFF5953 Class D beta-lactamase (EC 3.5.2.6) no 0.53
    6 GFF1236 Methionine sulfoxide reductase molybdopterin-binding subunit no 0.53
    7 GFF6139 Serine/threonine kinase no 0.53
    8 GFF1277 Alkanesulfonates-binding protein no 0.52
    9 GFF1852 FHA domain protein no 0.52
    10 GFF5428 YaeQ protein no 0.52
    11 GFF5287 FIG00455092: hypothetical protein no 0.51
    12 GFF5799 Urea ABC transporter, substrate-binding protein UrtA no 0.51
    13 GFF2752 FIG00974677: hypothetical protein no 0.50
    14 GFF6624 hypothetical protein no 0.50
    15 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.50
    16 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) no 0.50
    17 GFF3036 no description no 0.50
    18 GFF5820 hypothetical protein no 0.50
    19 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) no 0.50
    20 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.50

    Or look for negative cofitness