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  • Top cofit genes for GFF6086 from Variovorax sp. SCN45

    Putative short-chain dehydrogenase
    SEED: Probable short-chain dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1149 FIG110192: hypothetical protein no 0.69
    2 GFF3386 hypothetical protein no 0.67
    3 GFF1768 FIG00729359: hypothetical protein no 0.65
    4 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.65
    5 GFF6635 FIG00441227: hypothetical protein no 0.65
    6 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.64
    7 GFF6020 UPF0246 protein YaaA no 0.61
    8 GFF7374 FIG00984748: hypothetical protein no 0.61
    9 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.60
    10 GFF5094 BUG/TctC family periplasmic protein no 0.59
    11 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.59
    12 GFF1825 Mg(2+) transport ATPase, P-type (EC 3.6.3.2) no 0.58
    13 GFF5746 Flagellar protein FliJ no 0.57
    14 GFF4444 Predicted nucleotidyltransferase no 0.57
    15 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.56
    16 GFF5840 hypothetical protein no 0.56
    17 GFF508 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) 0.25 0.56
    18 GFF4964 Sulfate permease no 0.56
    19 GFF3284 hypothetical protein no 0.55
    20 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.55

    Or look for negative cofitness