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  • Top cofit genes for GFF6085 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4637 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-) no 0.62
    2 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.61
    3 GFF4632 Glycosyl transferase, family 2 no 0.60
    4 GFF2452 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) no 0.60
    5 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) 0.21 0.60
    6 GFF665 hypothetical protein no 0.60
    7 GFF1126 Metal transporter, ZIP family 0.44 0.59
    8 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.59
    9 GFF7361 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.59
    10 GFF424 Cobalamin synthase (EC 2.7.8.26) no 0.59
    11 GFF486 FIG00582348: hypothetical protein no 0.58
    12 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.58
    13 GFF5474 no description no 0.57
    14 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.57
    15 GFF450 Outer membrane vitamin B12 receptor BtuB no 0.56
    16 GFF4638 CDP-glucose 4,6-dehydratase (EC 4.2.1.45) no 0.56
    17 GFF4829 Isocitrate lyase (EC 4.1.3.1) 0.20 0.55
    18 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.55
    19 GFF6467 Nucleoside-diphosphate-sugar epimerases no 0.55
    20 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage no 0.54

    Or look for negative cofitness