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  • Top cofit genes for GFF6080 from Variovorax sp. SCN45

    Putative deoxyribonuclease YjjV
    SEED: Putative deoxyribonuclease YjjV
    KEGG: TatD DNase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF803 MutT/Nudix family protein no 0.61
    2 GFF7211 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.60
    3 GFF6574 Conjugative transfer protein TrbL no 0.57
    4 GFF2074 hypothetical protein no 0.57
    5 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.56
    6 GFF2107 no description no 0.56
    7 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.56
    8 GFF3177 hypothetical protein no 0.55
    9 GFF1487 Tetrapartite efflux system component, FusD-like no 0.55
    10 GFF5299 TonB-dependent receptor no 0.53
    11 GFF6251 hypothetical protein no 0.53
    12 GFF6672 no description no 0.53
    13 GFF2596 Multidrug resistance transporter, Bcr/CflA family no 0.51
    14 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.61 0.51
    15 GFF3243 Flavin containing amine oxidoreductase no 0.51
    16 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.51
    17 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.51
    18 GFF5600 no description no 0.50
    19 GFF3263 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family no 0.50
    20 GFF418 Endonuclease III (EC 4.2.99.18) 0.57 0.50

    Or look for negative cofitness