• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_03090 from Pseudomonas simiae WCS417

    type II secretion system protein F
    SEED: Flp pilus assembly protein TadB
    KEGG: tight adherence protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03050 hypothetical protein 0.57 0.48
    2 PS417_06365 RNA polymerase sigma factor 0.35 0.43
    3 PS417_03070 LuxR family transcriptional regulator 0.44 0.42
    4 PS417_03065 peptidase A24 0.29 0.39
    5 PS417_21375 ADP-ribosylglycohydrolase no 0.37
    6 PS417_21045 cysteine synthase no 0.36
    7 PS417_03060 pilus assembly protein TadE 0.50 0.36
    8 PS417_03095 ATPase 0.91 0.36
    9 PS417_12550 chemotaxis protein no 0.35
    10 PS417_16160 ABC transporter substrate-binding protein no 0.35
    11 PS417_06970 LysR family transcriptional regulator no 0.35
    12 PS417_20955 secretion protein no 0.35
    13 PS417_24820 ethanolamine ammonia-lyase no 0.34
    14 PS417_03895 methyltransferase 0.42 0.34
    15 PS417_28265 pyridoxamine kinase no 0.34
    16 PS417_03105 secretin 0.92 0.34
    17 PS417_03110 pilus assembly protein CpaB 0.31 0.33
    18 PS417_13425 cupin 0.27 0.33
    19 PS417_03085 type II secretion system protein F 0.37 0.31
    20 PS417_27505 transcriptional regulator no 0.31

    Or look for negative cofitness