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  • Top cofit genes for GFF608 from Variovorax sp. SCN45

    VgrG protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4612 Short-chain dehydrogenase/reductase SDR no 0.56
    2 GFF911 KEGG: transcriptional regulator no 0.55
    3 GFF3389 Glycosyl transferases, related to UDP-glucuronosyltransferase no 0.55
    4 GFF3613 Protein of unknown function DUF55 no 0.53
    5 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.53
    6 GFF3581 Transcriptional regulator, ArsR family no 0.53
    7 GFF3148 no description no 0.52
    8 GFF7171 Transcriptional regulator DmlR, LysR family no 0.52
    9 GFF443 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.51
    10 GFF6496 Tannase and feruloyl esterase no 0.51
    11 GFF4934 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.51
    12 GFF7083 Mobile element protein no 0.50
    13 GFF347 Exported protein no 0.49
    14 GFF2993 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases no 0.49
    15 GFF455 Uncharacterized UPF0721 integral membrane protein no 0.48
    16 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.48
    17 GFF7003 Flagellar basal-body rod protein FlgF no 0.48
    18 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) no 0.48
    19 GFF5834 Oxidoreductase, GMC family no 0.47
    20 GFF5911 Probable L-amino-acid oxidase (EC 1.4.3.2) no 0.47

    Or look for negative cofitness