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  • Top cofit genes for GFF6073 from Variovorax sp. SCN45

    Tripartite tricarboxylate transporter TctA family
    SEED: Tricarboxylate transport membrane protein TctA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1252 Alkanesulfonate ABC transporter permease protein SsuC no 0.58
    2 GFF6417 BUG/TctC family periplasmic protein no 0.55
    3 GFF1472 Tricarboxylate transport protein TctC no 0.54
    4 GFF4024 Transcriptional regulator, MerR family no 0.53
    5 GFF7358 Phenylacetate ABC transporter, permease protein 2 no 0.52
    6 GFF6909 Amidohydrolase no 0.51
    7 GFF3793 no description no 0.51
    8 GFF6072 Transcriptional regulator, LysR family no 0.50
    9 GFF6276 Uncharacterized MFS-type transporter no 0.50
    10 GFF1034 UPF0313 [4Fe-4S] protein YgiQ no 0.49
    11 GFF6058 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.49
    12 GFF3666 Inner membrane protein YbiR, putative anion permease no 0.49
    13 GFF4420 Conjugative transfer protein TrbL no 0.49
    14 GFF1650 NmrA-like no 0.48
    15 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) no 0.48
    16 GFF877 putative membrane protein no 0.48
    17 GFF2560 FIG00932643: hypothetical protein no 0.47
    18 GFF1023 UPF0311 protein RPA1785 no 0.47
    19 GFF4226 Acryloyl-CoA reductase AcuI/YhdH (EC 1.3.1.84) no 0.47
    20 GFF5379 Putative hydrolase no 0.47

    Or look for negative cofitness