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  • Top cofit genes for GFF6072 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4496 Uncharacterized MFS-type transporter no 0.51
    2 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.50
    3 GFF2121 Type IV fimbrial biogenesis protein PilY1 no 0.50
    4 GFF6308 no description no 0.50
    5 GFF1587 no description no 0.50
    6 GFF6719 hypothetical protein no 0.48
    7 GFF4690 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.47
    8 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) no 0.46
    9 GFF2762 Glutamine ABC transporter, substrate-binding protein GlnH no 0.46
    10 GFF6830 penicillin amidase family protein no 0.46
    11 GFF5537 Cell division inhibitor SulA no 0.46
    12 GFF4975 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.46
    13 GFF4222 Butyryl-CoA dehydrogenase (EC 1.3.99.2) no 0.46
    14 GFF2953 Transcriptional regulator, AraC family no 0.45
    15 GFF1222 Methylglyoxal synthase (EC 4.2.3.3) no 0.45
    16 GFF2037 Acetylpolyamine aminohydrolase no 0.45
    17 GFF1380 Peptidase M48, Ste24p no 0.45
    18 GFF1037 putative membrane protein no 0.45
    19 GFF5456 L-threonate/D-erythronate transcriptional regulator, GntR family no 0.45
    20 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.44

    Or look for negative cofitness