• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_03085 from Pseudomonas simiae WCS417

    type II secretion system protein F
    SEED: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
    KEGG: tight adherence protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03075 hypothetical protein no 0.36
    2 PS417_03050 hypothetical protein 0.50 0.35
    3 PS417_03070 LuxR family transcriptional regulator 0.41 0.33
    4 PS417_03060 pilus assembly protein TadE 0.44 0.33
    5 PS417_03090 type II secretion system protein F 0.34 0.31
    6 PS417_03080 hypothetical protein 0.48 0.30
    7 PS417_03125 potassium ABC transporter ATPase 0.48 0.30
    8 PS417_03910 pilus assembly protein no 0.29
    9 PS417_05990 diguanylate cyclase 0.28 0.28
    10 PS417_03055 histidine kinase 0.46 0.28
    11 PS417_05980 chemotaxis protein CheA 0.41 0.27
    12 PS417_03105 secretin 0.33 0.27
    13 PS417_03095 ATPase 0.38 0.26
    14 PS417_03110 pilus assembly protein CpaB 0.57 0.26
    15 PS417_11900 conjugal transfer protein TraR no 0.26
    16 PS417_21375 ADP-ribosylglycohydrolase no 0.25
    17 PS417_11315 hemagglutinin no 0.25
    18 PS417_03895 methyltransferase 0.30 0.24
    19 PS417_05110 peptidase no 0.24
    20 PS417_24155 ATP-binding protein no 0.24

    Or look for negative cofitness