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  • Top cofit genes for GFF6061 from Variovorax sp. SCN45

    3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)
    SEED: 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) 0.61 0.55
    2 GFF5340 Efflux ABC transporter, ATP-binding protein 0.29 0.53
    3 GFF5662 no description no 0.52
    4 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR no 0.52
    5 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.51
    6 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) no 0.51
    7 GFF4961 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    8 GFF5039 no description no 0.51
    9 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) no 0.50
    10 GFF3504 BUG/TctC family periplasmic protein no 0.50
    11 GFF2685 DNA internalization-related competence protein ComEC/Rec2 no 0.50
    12 GFF5669 hypothetical protein no 0.50
    13 GFF1766 no description no 0.50
    14 GFF6107 Zinc transporter, ZIP family no 0.50
    15 GFF2022 Acyl-CoA dehydrogenase no 0.49
    16 GFF6834 no description no 0.49
    17 GFF6136 TRAP transporter solute receptor, unknown substrate 6 no 0.49
    18 GFF3670 Two-component system sensor histidine kinase no 0.49
    19 GFF1064 Transcriptional regulator, GntR family no 0.49
    20 GFF211 protein of unknown function UPF0125 no 0.48

    Or look for negative cofitness