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  • Top cofit genes for PS417_03080 from Pseudomonas simiae WCS417

    hypothetical protein
    SEED: Flp pilus assembly protein TadD, contains TPR repeats

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03085 type II secretion system protein F 0.48 0.30
    2 PS417_03895 methyltransferase 0.47 0.28
    3 PS417_03095 ATPase 0.38 0.27
    4 PS417_03105 secretin 0.32 0.26
    5 PS417_03050 hypothetical protein 0.46 0.25
    6 PS417_03075 hypothetical protein no 0.24
    7 PS417_05980 chemotaxis protein CheA no 0.23
    8 PS417_28535 TonB-dependent receptor no 0.23
    9 PS417_03055 histidine kinase 0.43 0.22
    10 PS417_24885 transcriptional regulator no 0.21
    11 PS417_09700 transaldolase no 0.21
    12 PS417_03910 pilus assembly protein no 0.21
    13 PS417_09720 methyltransferase 0.13 0.21
    14 PS417_04375 ABC transporter ATP-binding protein no 0.21
    15 PS417_03070 LuxR family transcriptional regulator 0.36 0.20
    16 PS417_18870 hypothetical protein no 0.20
    17 PS417_27505 transcriptional regulator 0.23 0.20
    18 PS417_03060 pilus assembly protein TadE 0.44 0.20
    19 PS417_09695 hydrolase no 0.20
    20 PS417_20985 porin no 0.20

    Or look for negative cofitness