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    • Top cofit genes for GFF606 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3620 hypothetical protein no 0.53
    2 GFF78 Cytochrome c family protein no 0.50
    3 GFF3530 Pseudouridine synthase no 0.50
    4 GFF3187 hypothetical protein no 0.49
    5 GFF3985 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    6 GFF6801 Transcriptional regulator, GntR family no 0.48
    7 GFF3612 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    8 GFF2280 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    9 GFF4719 hypothetical protein no 0.47
    10 GFF1908 Short-chain dehydrogenases of various substrate specificities no 0.45
    11 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.45
    12 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.45
    13 GFF3591 Glutathione reductase (EC 1.8.1.7) no 0.45
    14 GFF749 4-oxalomesaconate hydratase (EC 4.2.1.83) no 0.45
    15 GFF585 no description no 0.44
    16 GFF1102 Uncharacterized oxidoreductase YdgJ no 0.44
    17 GFF3845 Ribonuclease E (EC 3.1.26.12) no 0.44
    18 GFF6374 predicted 2-keto-3-deoxyxylonate dehydratase no 0.44
    19 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.43
    20 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.43

    Or look for negative cofitness