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  • Top cofit genes for PS417_03070 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: DNA-binding response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor 0.67 0.64
    2 PS417_13425 cupin no 0.62
    3 PS417_28265 pyridoxamine kinase no 0.56
    4 PS417_03050 hypothetical protein 0.68 0.56
    5 PS417_12610 RNA polymerase sigma factor no 0.55
    6 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.58 0.55
    7 PS417_16370 chemotaxis protein CheY 0.72 0.55
    8 PS417_20955 secretion protein no 0.55
    9 PS417_03125 potassium ABC transporter ATPase 0.62 0.52
    10 PS417_21045 cysteine synthase no 0.52
    11 PS417_05975 chemotaxis protein CheW no 0.52
    12 PS417_10720 chemotaxis protein CheY 0.71 0.51
    13 PS417_21050 serine acetyltransferase no 0.51
    14 PS417_16160 ABC transporter substrate-binding protein no 0.51
    15 PS417_12550 chemotaxis protein no 0.50
    16 PS417_16070 TonB-dependent receptor no 0.49
    17 PS417_12825 MFS transporter no 0.49
    18 PS417_11170 aldehyde dehydrogenase 0.29 0.48
    19 PS417_21375 ADP-ribosylglycohydrolase 0.17 0.48
    20 PS417_19145 membrane protein 0.50 0.48

    Or look for negative cofitness