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  • Top cofit genes for PS417_03065 from Pseudomonas simiae WCS417

    peptidase A24
    SEED: Flp pilus assembly protein CpaA
    KEGG: prepilin peptidase CpaA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03050 hypothetical protein 0.47 0.44
    2 PS417_03070 LuxR family transcriptional regulator 0.40 0.43
    3 PS417_03910 pilus assembly protein no 0.43
    4 PS417_03090 type II secretion system protein F 0.29 0.39
    5 PS417_03095 ATPase 0.34 0.38
    6 PS417_06365 RNA polymerase sigma factor 0.24 0.36
    7 PS417_03110 pilus assembly protein CpaB 0.24 0.36
    8 PS417_27605 hypothetical protein 0.20 0.35
    9 PS417_03060 pilus assembly protein TadE 0.98 0.35
    10 PS417_22610 pilus assembly protein PilZ 0.28 0.33
    11 PS417_03105 secretin 0.26 0.33
    12 PS417_03055 histidine kinase 0.43 0.32
    13 PS417_03125 potassium ABC transporter ATPase 0.43 0.32
    14 PS417_20955 secretion protein no 0.31
    15 PS417_13425 cupin no 0.30
    16 PS417_26620 malonate decarboxylase subunit alpha no 0.30
    17 PS417_16160 ABC transporter substrate-binding protein no 0.30
    18 PS417_28265 pyridoxamine kinase no 0.29
    19 PS417_09640 capsular biosynthesis protein 0.14 0.29
    20 PS417_03115 pilus assembly protein 0.28 0.29

    Or look for negative cofitness