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    • Top cofit genes for GFF6029 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1255 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) no 0.56
    2 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no 0.54
    3 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.54
    4 GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain 0.38 0.52
    5 GFF64 hypothetical protein no 0.52
    6 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.49
    7 GFF7362 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    8 GFF6343 no description no 0.47
    9 GFF3965 Alcohol dehydrogenase, zinc-binding no 0.47
    10 GFF4444 Predicted nucleotidyltransferase no 0.47
    11 GFF7158 Pirin no 0.46
    12 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.45
    13 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.45
    14 GFF4502 Putative transmembrane protein no 0.45
    15 GFF5327 Uncharacterized MFS-type transporter no 0.44
    16 GFF5993 putative membrane protein no 0.44
    17 GFF4709 putative membrane protein no 0.44
    18 GFF2202 hypothetical protein no 0.43
    19 GFF5977 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23) no 0.42
    20 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) no 0.42

    Or look for negative cofitness