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  • Top cofit genes for GFF6020 from Variovorax sp. SCN45

    UPF0246 protein YaaA
    SEED: UPF0246 protein YaaA
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.68
    2 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.52 0.63
    3 GFF7374 FIG00984748: hypothetical protein no 0.63
    4 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.62
    5 GFF6086 Putative short-chain dehydrogenase no 0.61
    6 GFF2683 Protein containing domains DUF404, DUF407 0.41 0.60
    7 GFF5598 putative phospholipase D family protein no 0.60
    8 GFF4799 hypothetical protein no 0.59
    9 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) 0.49 0.59
    10 GFF3386 hypothetical protein no 0.58
    11 GFF4502 Putative transmembrane protein no 0.58
    12 GFF6635 FIG00441227: hypothetical protein 0.20 0.58
    13 GFF2682 Protein containing domains DUF403 0.24 0.57
    14 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.57
    15 GFF7373 CaiB/BaiF family protein no 0.56
    16 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.56
    17 GFF1268 FIG022199: FAD-binding protein no 0.55
    18 GFF5409 FIG00576366: hypothetical protein no 0.55
    19 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.48 0.55
    20 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.55

    Or look for negative cofitness