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  • Top cofit genes for PS417_03060 from Pseudomonas simiae WCS417

    pilus assembly protein TadE
    SEED: Flp pilus assembly protein TadG

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03105 secretin 0.59 0.41
    2 PS417_03070 LuxR family transcriptional regulator 0.60 0.41
    3 PS417_03050 hypothetical protein 0.74 0.39
    4 PS417_03095 ATPase 0.52 0.39
    5 PS417_03895 methyltransferase 0.47 0.38
    6 PS417_06365 RNA polymerase sigma factor 0.26 0.36
    7 PS417_03090 type II secretion system protein F 0.50 0.36
    8 PS417_03065 peptidase A24 0.98 0.35
    9 PS417_03125 potassium ABC transporter ATPase 0.71 0.33
    10 PS417_03075 hypothetical protein 0.45 0.33
    11 PS417_20955 secretion protein no 0.33
    12 PS417_03085 type II secretion system protein F 0.44 0.33
    13 PS417_03110 pilus assembly protein CpaB 0.46 0.33
    14 PS417_03910 pilus assembly protein no 0.32
    15 PS417_26620 malonate decarboxylase subunit alpha 0.25 0.32
    16 PS417_21375 ADP-ribosylglycohydrolase no 0.31
    17 PS417_01895 poly(R)-hydroxyalkanoic acid synthase 0.64 0.30
    18 PS417_28265 pyridoxamine kinase no 0.30
    19 PS417_16160 ABC transporter substrate-binding protein no 0.30
    20 PS417_21050 serine acetyltransferase no 0.29

    Or look for negative cofitness