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  • Top cofit genes for GFF6015 from Variovorax sp. SCN45

    Transcriptional regulator PA0877, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6383 FIG00440100: hypothetical protein 0.30 0.68
    2 GFF924 hypothetical protein no 0.61
    3 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.60
    4 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.60
    5 GFF775 no description no 0.60
    6 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.59
    7 GFF5053 Uncharacterized protein SPO0681 no 0.58
    8 GFF2329 Phosphoglycerate mutase (EC 5.4.2.11) no 0.58
    9 GFF491 no description no 0.58
    10 GFF4028 Cytochrome c, class I no 0.57
    11 GFF3273 Translation initiation factor 2 no 0.57
    12 GFF2687 Protein containing domains DUF404, DUF407, DUF403 no 0.56
    13 GFF6224 T6SS component TssK (ImpJ/VasE) no 0.56
    14 GFF160 hypothetical protein no 0.56
    15 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) no 0.56
    16 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) no 0.56
    17 GFF3219 hypothetical protein no 0.56
    18 GFF6126 putative membrane protein no 0.56
    19 GFF6394 Lipase precursor (EC 3.1.1.3) no 0.56
    20 GFF5552 MaoC domain protein dehydratase no 0.55

    Or look for negative cofitness