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Cofit
Protein
Homologs
Top cofit genes for GFF6014 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7342
Oxidoreductase
no
0.60
2
GFF4972
Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.58
3
GFF5648
ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates)
no
0.56
4
GFF6373
T6SS component TssA (ImpA)
no
0.55
5
GFF5843
hypothetical protein
no
0.54
6
GFF1977
L-asparaginase (EC 3.5.1.1)
no
0.54
7
GFF2047
Polyhydroxyalkanoic acid synthase
no
0.53
8
GFF4246
FIG00464377: hypothetical protein
no
0.53
9
GFF5224
Uncharacterized MFS-type transporter
no
0.53
10
GFF1128
Alkyl hydroperoxide reductase subunit C-like protein
no
0.53
11
GFF2838
hypothetical protein
no
0.52
12
GFF4968
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
no
0.52
13
GFF6033
Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1)
no
0.51
14
GFF378
RNA (nucleoside 2'-O)-methyltransferase
no
0.51
15
GFF5293
N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
no
0.51
16
GFF1629
Ferric reductase (1.6.99.14)
no
0.51
17
GFF677
FIG00931906: hypothetical protein
no
0.50
18
GFF1957
no description
no
0.50
19
GFF5035
Opine oxidase subunit A
no
0.50
20
GFF4878
putative lipoprotein
no
0.50
Or look for
negative cofitness