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  • Top cofit genes for GFF6014 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7342 Oxidoreductase no 0.60
    2 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.58
    3 GFF5648 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.56
    4 GFF6373 T6SS component TssA (ImpA) no 0.55
    5 GFF5843 hypothetical protein no 0.54
    6 GFF1977 L-asparaginase (EC 3.5.1.1) no 0.54
    7 GFF2047 Polyhydroxyalkanoic acid synthase no 0.53
    8 GFF4246 FIG00464377: hypothetical protein no 0.53
    9 GFF5224 Uncharacterized MFS-type transporter no 0.53
    10 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.53
    11 GFF2838 hypothetical protein no 0.52
    12 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.52
    13 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.51
    14 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.51
    15 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) no 0.51
    16 GFF1629 Ferric reductase (1.6.99.14) no 0.51
    17 GFF677 FIG00931906: hypothetical protein no 0.50
    18 GFF1957 no description no 0.50
    19 GFF5035 Opine oxidase subunit A no 0.50
    20 GFF4878 putative lipoprotein no 0.50

    Or look for negative cofitness