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  • Top cofit genes for GFF6000 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2984 Adenosine deaminase (EC 3.5.4.4) no 0.59
    2 GFF2343 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.57
    3 GFF2736 Uncharacterized MFS-type transporter no 0.54
    4 GFF4853 Transcriptional regulator, LysR family no 0.52
    5 GFF6243 Ku domain protein no 0.48
    6 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.48
    7 GFF7027 no description no 0.48
    8 GFF845 dTDP-glucose 4,6-dehydratase no 0.47
    9 GFF1032 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.47
    10 GFF5580 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) no 0.47
    11 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.47
    12 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.46
    13 GFF201 Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ) no 0.46
    14 GFF7291 Magnesium and cobalt transport protein CorA no 0.46
    15 GFF1030 Ferredoxin reductase no 0.45
    16 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) no 0.44
    17 GFF2089 CDP-alcohol phosphatidyltransferase family protein no 0.44
    18 GFF4382 FIG00957806: hypothetical protein no 0.43
    19 GFF4351 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.43
    20 GFF6576 Conjugative transfer protein TrbE no 0.43

    Or look for negative cofitness