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  • Top cofit genes for GFF5991 from Variovorax sp. SCN45

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: RND efflux system, outer membrane lipoprotein CmeC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4211 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.56
    2 GFF5376 hypothetical protein no 0.51
    3 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) no 0.50
    4 GFF5245 FIG00771430: hypothetical protein no 0.50
    5 GFF7167 Pirin no 0.49
    6 GFF4579 putative oxidoreductase, nitronate monooxygenase family 0.81 0.49
    7 GFF6554 Putative ATP/GTP-binding protein no 0.48
    8 GFF5299 TonB-dependent receptor no 0.48
    9 GFF507 Hydrolase, alpha/beta fold family no 0.47
    10 GFF2263 putative membrane protein no 0.46
    11 GFF4048 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.46
    12 GFF5495 Putative transmembrane protein no 0.46
    13 GFF4527 Transcriptional regulator, GntR family no 0.44
    14 GFF1948 Phage integrase no 0.44
    15 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) no 0.44
    16 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.44
    17 GFF2666 Membrane-bound lytic murein transglycosylase B no 0.43
    18 GFF1634 Ferrichrome-iron receptor 0.26 0.43
    19 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.42
    20 GFF103 General secretion pathway protein E no 0.42

    Or look for negative cofitness