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  • Top cofit genes for GFF5987 from Variovorax sp. SCN45

    Response regulator BaeR
    SEED: Response regulator BaeR
    KEGG: two-component system, OmpR family, response regulator BaeR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4068 Heavy metal sensor histidine kinase no 0.60
    2 GFF6003 no description no 0.53
    3 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.15 0.53
    4 GFF1232 Uncharacterized protein conserved in bacteria no 0.50
    5 GFF6860 Epoxide hydrolase (EC 3.3.2.9) no 0.50
    6 GFF2182 Inner membrane component of TAM transport system no 0.50
    7 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.50
    8 GFF4989 Transcriptional regulator, LysR family no 0.50
    9 GFF4270 Transcriptional regulator, AcrR family no 0.50
    10 GFF4264 surface antigen gene no 0.49
    11 GFF721 O-acetyl-ADP-ribose deacetylase no 0.49
    12 GFF5118 gluconolactonase family protein no 0.49
    13 GFF3205 no description no 0.49
    14 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.46 0.49
    15 GFF5454 Transcriptional regulator, AsnC family no 0.48
    16 GFF2599 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.48
    17 GFF4364 Transcriptional regulator, LysR family no 0.48
    18 GFF2446 FIG00956403: hypothetical protein no 0.47
    19 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.47
    20 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.47

    Or look for negative cofitness