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  • Top cofit genes for GFF5985 from Variovorax sp. SCN45

    dicarboxylic acid transporter PcaT
    SEED: dicarboxylic acid transporter PcaT
    KEGG: MFS transporter, MHS family, alpha-ketoglutarate permease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2328 no description no 0.62
    2 GFF3370 hypothetical protein no 0.62
    3 GFF1758 KEGG: carboxymethylenebutenolidase no 0.61
    4 GFF1338 ABC transporter, permease protein 1 RSc1751 0.64 0.58
    5 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) no 0.58
    6 GFF109 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.57
    7 GFF3755 Transcriptional regulator, GntR family no 0.57
    8 GFF272 thioesterase superfamily protein no 0.57
    9 GFF3547 no description no 0.57
    10 GFF117 no description no 0.56
    11 GFF5372 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.55
    12 GFF4595 Transcriptional regulator no 0.55
    13 GFF4482 Transcriptional regulator MraZ 0.30 0.55
    14 GFF3520 Osmosensitive K+ channel histidine kinase KdpD 0.51 0.55
    15 GFF1567 Demethylmenaquinone methyltransferase-like protein no 0.55
    16 GFF299 Ribosomal silencing factor RsfA no 0.55
    17 GFF2477 Tripartite tricarboxylate transporter TctA family no 0.53
    18 GFF1644 hypothetical protein no 0.53
    19 GFF273 Transcriptional regulator, Xre family 0.54 0.53
    20 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53

    Or look for negative cofitness