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  • Top cofit genes for GFF5983 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.68
    2 GFF3487 InterPro IPR005806 COGs COG2146 no 0.63
    3 GFF3655 no description no 0.59
    4 GFF117 no description no 0.59
    5 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.59
    6 GFF5127 no description no 0.58
    7 GFF7139 MATE efflux family protein no 0.58
    8 GFF2901 FIG00347713: hypothetical protein no 0.57
    9 GFF3450 Transcriptional regulator, LacI family no 0.57
    10 GFF864 no description no 0.57
    11 GFF4246 FIG00464377: hypothetical protein no 0.56
    12 GFF454 Z-ring-associated protein ZapA no 0.55
    13 GFF4812 no description no 0.55
    14 GFF5331 Transposase and inactivated derivatives 0.31 0.55
    15 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.55
    16 GFF7028 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.54
    17 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) no 0.54
    18 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.54
    19 GFF4843 Conjugative transfer protein TrbF no 0.53
    20 GFF933 YgfD: protein that forms a complex with the methylmalonyl-CoA mutase in a pathway for conversion of succinyl-CoA to propionyl-CoA no 0.53

    Or look for negative cofitness