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  • Top cofit genes for GFF5975 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2982 Histone acetyltransferase HPA2 and related acetyltransferases no 0.50
    2 GFF6845 ATPase involved in DNA repair no 0.49
    3 GFF4689 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein CzcB no 0.48
    4 GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) no 0.48
    5 GFF7090 Small subunit naph/bph dioxygenase no 0.45
    6 GFF3565 Acyl-CoA dehydrogenase no 0.44
    7 GFF5107 Transcriptional regulator, LysR family no 0.43
    8 GFF4269 Uncharacterized SAM-dependent O-methyltransferase no 0.42
    9 GFF1852 FHA domain protein no 0.42
    10 GFF519 Transcriptional regulator, AcrR family no 0.41
    11 GFF2520 UPF0053 inner membrane protein YtfL no 0.41
    12 GFF283 no description no 0.41
    13 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) no 0.40
    14 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.40
    15 GFF6389 Amidohydrolase domain protein no 0.40
    16 GFF1656 hypothetical protein no 0.40
    17 GFF5994 Chlorogenate esterase no 0.40
    18 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.40
    19 GFF4785 AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system no 0.39
    20 GFF6026 no description no 0.39

    Or look for negative cofitness