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  • Top cofit genes for GFF5974 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5701 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) no 0.68
    2 GFF2482 Urease accessory protein UreE no 0.58
    3 GFF2144 tRNA-dihydrouridine synthase DusB no 0.58
    4 GFF2697 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.56
    5 GFF2936 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.55
    6 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 no 0.55
    7 GFF2129 small multidrug resistance family (SMR) protein no 0.54
    8 GFF6328 LPS-assembly lipoprotein LptE no 0.54
    9 GFF4292 no description no 0.53
    10 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) no 0.53
    11 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.53
    12 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.53
    13 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) no 0.53
    14 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.52
    15 GFF2842 RNA polymerase sigma factor RpoS no 0.51
    16 GFF490 Cell division trigger factor (EC 5.2.1.8) no 0.51
    17 GFF2855 Putative hydrolase or acyltransferase no 0.51
    18 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.51
    19 GFF2498 Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1) no 0.51
    20 GFF2499 ATP/GTP-binding protein no 0.50

    Or look for negative cofitness